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Seneviratne Gamini - Agro-Environmental Sustainability Volume 1: Managing Crop Health

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Seneviratne Gamini Agro-Environmental Sustainability Volume 1: Managing Crop Health

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Springer International Publishing AG 2017
Jay Shankar Singh and Gamini Seneviratne (eds.) Agro-Environmental Sustainability 10.1007/978-3-319-49724-2_1
1. Microbial Signaling in PlantMicrobe Interactions and Its Role on Sustainability of Agroecosystems
G. Seneviratne 1 , M. L. M. A. W. Weerasekara 2, D. Kumaresan 2 and J. S. Zavahir 3
(1)
Microbial Biotechnology Unit, National Institute of Fundamental Studies, Hantana Road, Kandy, Sri Lanka
(2)
Faculty of Natural and Agricultural Sciences, School of Earth and Environment, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia
(3)
Geocycle (SBF), 92 Ordish Road, Dandenong South, 3175, VIC, Australia
G. Seneviratne
Email:
Abstract
Sustainability in agroecosystems is governed primarily by the functional balance between soil processes and plant productivity. Microorganisms are key drivers of important soil processes such as nutrient recycling, and their activity directly influences the functional stability and sustainability of the soil ecosystem. In nature, microbes tend to function as functional guilds or communities, thereby creating a complex network of microbial interactions. Therefore, microbial signalling processes play an important role in communication within a particular functional guild or among different guilds. Numerous chemical compounds acting as signalling molecules in the soil-plant system have been identified. However, the understanding of how these molecules contribute to soil ecosystem stability and sustainability through inter- and intra-species chemical signalling is incomplete. In particular, it is known that chemical inputs in agroecosystems can suppress some microbes (e.g. nitrogen fixers), which can also reduce the interactions between microbes due to destruction of the signalling networks, consequently breaking the delicate balance of the soil ecosystem. Understanding the impact of microbial signalling processes on soil ecosystem sustainability is imperative if we are to address this issue. This chapter reviews the current knowledge on the mechanisms of microbial signalling in plantmicrobe interactions and technical advances in identifying signalling pathways between plants and soil and also proposes avenue for future research in this field.
Keywords
Microbial signalling Ecosystem sustainability Plantmicrobe interaction Chemical fertilizers
1.1 Introduction
Soils are complex ecosystems, composed of both biotic and abiotic components with regular interactions between both these components to maintain ecosystem function. Bot and Benites ().
Soil biotic components are key drivers of important soil processes such as decomposition of organic matter, nutrient recycling, detoxification of toxicants, and suppression of noxious and pathogenic organisms (Doran and Zeiss ).
The diversity and abundance of life that exists within the soil ecosystem is greater perhaps than in any other ecosystem. With 1g of soil holding up to ten billion microorganisms and thousands of different species (Knietsch et al. ). Hence, understanding how these microorganisms maintain a correct balance between inter- and intra-species interactions is important for sustenance of soil ecosystems. There is at present an incomplete understanding of plantmicrobial signaling compounds and the mechanisms underlying plantmicrobe interaction in both symbiotic and defence associations. In particular, the importance of chemical signaling in ecosystem sustainability is less documented and calls for further attention. Thus, this chapter highlights the fact that sustainability of soil ecosystem is an outcome of maintaining a robust signaling stability within soil microbes and also optimizing plantmicrobe interactions.
1.2 Signalling Molecules in PlantMicrobe Interactions
Plantmicrobe interaction is critical to maintain soil health and sustainability (Tak et al. ). It has long been known that plants and microbes interact closely through the release of signaling compounds forming an array of symbiotic and defence associations.
To date, a plethora of such chemical compounds acting as signaling molecules in the soil-plant feedback system have been identified (Berg ).
The signaling compounds play diverse roles in ensuring benefits to both parties of the plantmicrobe interaction. Phytohormones, such as auxins and cytokinins, produced by either bacteria or fungi, can act as signaling molecules and affect cell proliferation or modify root system architecture by overproduction of lateral roots and root hairs with a subsequent increase of nutrient and water uptake (Ortz-Castro et al. ).
Long-term close interactions between different biological species, such as symbiosis and pathogenesis, are common between plants and soil microorganisms. Among the astounding number of such mutualistic associations, the legumerhizobia nitrogen-fixing symbiosis of plantbacterial nature and that of mycorrhizae of plantfungal nature are well documented. Such relationships rely largely on various signaling molecules to ensure their sustenance. For example, phenolic acids, the main polyphenols made by plants, carry out diverse tasks which include acting as signaling molecules in the initiation of legumerhizobia symbioses, establishment of arbuscular mycorrhizal symbioses and acting as agents in plant defence mechanisms (Mandal et al. ).
In nature, microbes tend to function as functional guilds or communities, sometimes comprising of billions densely packed cells. Biofilms, one such group of communities, are adherent cells embedded within a self-produced matrix of extra cellular polymeric substance (EPS). Coordination of metabolic interactions among such biofilms is known to occur predominantly through quorum sensing (Reading and Sperandio ).
AHLs play an important role in the quorum sensing of different species. For instance, it is used for regulating diverse behaviours in rhizosphere inhabiting bacteria where in some situations plants may produce their own metabolites which may interfere with quorum-sensing signaling (Ortz-Castro et al. ).
Apart from the customary cell-to-cell communication via quorum sensing, it has been reported recently that electrical signals like potassium ion-channelling can be used to coordinate metabolism and to communicate within the biofilm (Beagle and Lockless ) reported that the catalytic activity of secreted class III peroxidases triggered directed growth of the soil-inhabiting plant pathogen Fusarium oxysporum towards the roots of the host plant tomato ( Solanum lycopersicum ). Thus, this wide array of signaling molecules and their specific functions within bacterial communities diversify the relationships in plantmicrobe interactions, and their role within the soil food web can be further explored.
1.3 Microbial Coordination of Complex Network Interaction Within Soil Food Web and PlantMicrobe Interactions
It is a known fact that soil bacterial communities use species-specific quorum-sensing signals or auto-inducers to coordinate gene expression within them, according to the density of their local population. However, subsequent findings have identified non-species-specific auto-inducers that are capable of mediating intra- and inter-species communication among different bacteria (Galloway et al. ).
In the presence of host plant physiological stress, many eukaryotic signal molecules are released and detected by Gram-negative pathogenic bacteria which respond by adapting their physiology for virulence (Lesouhaitier et al. ). Thus, it is clear that it is the microbes living in association with plants and also in the soil that contribute to ecosystem balance through signaling in complex network interactions.
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