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Hadley Wickham - R for Data Science

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Hadley Wickham R for Data Science

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Learn how to use R to turn data into insight, knowledge, and understanding. Ideal for current and aspiring data scientists, this book introduces you to doing data science with R and RStudio, as well as the tidyversea collection of R packages designed to work together to make data science fast, fluent, and fun. Even if you have no programming experience, this updated edition will have you doing data science quickly.Youll learn how to import, transform, and visualize your data and communicate the results. And youll get a complete, big-picture understanding of the data science cycle and the basic tools you need to manage the details. Each section in this edition includes exercises to help you practice what youve learned along the way.Updated for the latest tidyverse best practices, new chapters dive deeper into visualization and data wrangling, show you how to get data from spreadsheets, databases, and websites, and help you make the most of new programming tools.Youll learn how toVisualizecreate plots for data exploration and communication of resultsTransformdiscover types of variables and the tools you can use to work with themImportget data into R and in a form convenient for analysisProgramlearn R tools for solving data problems with greater clarity and ease

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R for Data Science by Hadley Wickham Mine etinkaya-Rundel and Garrett - photo 1
R for Data Science

by Hadley Wickham , Mine etinkaya-Rundel , and Garrett Grolemund

Copyright 2023 Hadley Wickham, Mine etinkaya-Rundel, and Garrett Grolemund. All rights reserved.

Printed in the United States of America.

Published by OReilly Media, Inc. , 1005 Gravenstein Highway North, Sebastopol, CA 95472.

OReilly books may be purchased for educational, business, or sales promotional use. Online editions are also available for most titles (http://oreilly.com). For more information, contact our corporate/institutional sales department: 800-998-9938 or corporate@oreilly.com.

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  • December 2016: First Edition
Revision History for the Early Release
  • 2022-12-13: First Release
  • 2023-02-23: Second Release
  • 2023-03-27: Third Release

See http://oreilly.com/catalog/errata.csp?isbn=9781492097402 for release details.

The OReilly logo is a registered trademark of OReilly Media, Inc. R for Data Science, the cover image, and related trade dress are trademarks of OReilly Media, Inc.

The views expressed in this work are those of the authors and do not represent the publishers views. While the publisher and the authors have used good faith efforts to ensure that the information and instructions contained in this work are accurate, the publisher and the authors disclaim all responsibility for errors or omissions, including without limitation responsibility for damages resulting from the use of or reliance on this work. Use of the information and instructions contained in this work is at your own risk. If any code samples or other technology this work contains or describes is subject to open source licenses or the intellectual property rights of others, it is your responsibility to ensure that your use thereof complies with such licenses and/or rights.

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Introduction

Data science is an exciting discipline that allows you to transform raw data into understanding, insight, and knowledge. The goal of R for Data Science is to help you learn the most important tools in R that will allow you to do data science efficiently and reproducibly, and to have some fun along the way! After reading this book, youll have the tools to tackle a wide variety of data science challenges using the best parts of R.

Preface to the second edition

Welcome to the second edition of R for Data Science! This is a major reworking of the first edition, removing material we no longer think is useful, adding material we wish we included in the first edition, and generally updating the text and code to reflect changes in best practices. Were also very excited to welcome a new co-author: Mine etinkaya-Rundel, a noted data science educator and one of our colleagues at Posit (the company formerly known as RStudio).

A brief summary of the biggest changes follows:

  • The first part of the book has been renamed to Whole game. The goal of this section is to give you the rough details of the whole game of data science before we dive into the details.

  • The second part of the book is Visualize. This part gives data visualization tools and best practices a more thorough coverage compared to the first edition. The best place to get all the details is still the ggplot2 book, but now R4DS covers more of the most important techniques.

  • The third part of the book is now called Transform and gains new chapters on numbers, logical vectors, and missing values. These were previously parts of the data transformation chapter, but needed much more room to cover all the details.

  • The fourth part of the book is called Import. Its a new set of chapters that goes beyond reading flat text files to working with spreadsheets, getting data out of databases, working with big data, rectangling hierarchical data, and scraping data from web sites.

  • The Program part remains, but has been rewritten from top-to-bottom to focus on the most important parts of function writing and iteration. Function writing now includes details on how to wrap tidyverse functions (dealing with the challenges of tidy evaluation), since this has become much easier and more important over the last few years. Weve added a new chapter on important base R functions that youre likely to see in wild-caught R code.

  • The modeling part has been removed. We never had enough room to fully do modelling justice, and there are now much better resources available. We generally recommend using the tidymodels packages and reading Tidy Modeling with R by Max Kuhn and Julia Silge.

  • The communicate part remains, but has been thoroughly updated to feature Quarto instead of R Markdown. This edition of the book has been written in quarto, and its clearly the tool of the future.

What you will learn

Data science is a vast field, and theres no way you can master it all by reading a single book. This book aims to give you a solid foundation in the most important tools and enough knowledge to find the resources to learn more when necessary. Our model of the steps of a typical data science project looks something like .

Figure I-1 In our model of the data science process you start with data - photo 2

Figure I-1. In our model of the data science process, you start with data import and tidying. Next, you understand your data with an iterative cycle of transforming, visualizing, and modeling. You finish the process by communicating your results to other humans.

First, you must import your data into R. This typically means that you take data stored in a file, database, or web application programming interface (API) and load it into a data frame in R. If you cant get your data into R, you cant do data science on it!

Once youve imported your data, it is a good idea to tidy it. Tidying your data means storing it in a consistent form that matches the semantics of the dataset with how it is stored. In brief, when your data is tidy, each column is a variable, and each row is an observation. Tidy data is important because the consistent structure lets you focus your efforts on answering questions about the data, not fighting to get the data into the right form for different functions.

Once you have tidy data, a common next step is to transform it. Transformation includes narrowing in on observations of interest (like all people in one city or all data from the last year), creating new variables that are functions of existing variables (like computing speed from distance and time), and calculating a set of summary statistics (like counts or means). Together, tidying and transforming are called wrangling because getting your data in a form thats natural to work with often feels like a fight!

Once you have tidy data with the variables you need, there are two main engines of knowledge generation: visualization and modeling. These have complementary strengths and weaknesses, so any real data analysis will iterate between them many times.

Visualization

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