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Onishi - Quantum Computational Chemistry: Modelling and Calculation for Functional Materials

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Onishi Quantum Computational Chemistry: Modelling and Calculation for Functional Materials
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This book is for both theoretical and experimental chemists to begin quantum molecular orbital calculations for functional materials. First, the theoretical background including the molecular orbital calculation method and modelling are explained. This is followed by an explanation of how to do modelling and calculation and to interpret calculated molecular orbitals, with many research examples in the field of batteries, catalysts, organic molecules and biomolecules. Finally, future trends in computational chemistry are introduced.

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Part I
Theoretical Background of Quantum Chemistry
Springer Nature Singapore Pte Ltd. 2018
Taku Onishi Quantum Computational Chemistry
1. Quantum Theory
Taku Onishi 1, 2, 3
(1)
CTCC, Department of Chemistry, University of Oslo, Oslo, Norway
(2)
Department of Applied Physics, Osaka University, Osaka, Japan
(3)
CUTE, Mie University, Mie, Japan
Taku Onishi
Email:
Abstract
By the difference of scale, matter is largely classified into solid, molecule and cluster. The basis unit of matter is atom. Atom consists of quantum particles such as electron, proton and neutron. In Bohr model, quantum effect is incorporated through the concept of matter wave. In the case of hydrogen, the orbit radius was estimated to be 0.5292 , corresponding to the experimental distance. In addition, the discrete energy was also reproduced. However, Bohr model was not able to be applicable to many-electron system. In order to incorporate particle-wave duality in universal manner, quantum wave-function was proposed. In wave-function theory, electron does not correspond to classical point, but spreads as wave. It is difficult to interpret wave-function itself. It is because it does not represent figure. Instead, the square of wave-function represents electron density. Wave-function can be obtained by solving the Schrdinger equation, where electron energy is given by operating wave-function with Hamiltonian. As a feature of wave-function, it is normalized and satisfies orthogonality. In quantum mechanics, one electron occupies one wave-function. It implies that one electron is not distributed to several wave-functions.
Keywords
Wave-particle duality Bohr model Quantum wave-function Schrdinger equation
1.1 Matter and Atom
By the difference of scale, matter is largely classified into the three: solid, molecule and cluster (nano-cluster), as shown in Fig.. Molecule and cluster exist in the basic three fundamental states: gas, liquid and solid (molecular solid). In quantum chemistry, electronic structure is normally discussed in three fundamental states. As the extreme environment, matter exists as plasma and superconducting states. In plasma state, matter is divided into positively charged ion and negatively charged electron at very high temperature. It has been considered that most of matter in space exists as plasma state. On the other hand, in superconducting state, electric resistance becomes zero at very low temperature, though matter keeps the same crystal structure.
Fig 11 Basic three fundamental states of matter The basis unit of matter - photo 1
Fig. 1.1
Basic three fundamental states of matter
The basis unit of matter is atom. Atom consists of quantum particles such as electron, proton and neutron. As they belong to Fermi particle, the spin angular momentum becomes half-integer. Atom has an atomic nucleus at the centre, consisting of proton and neutron. As is well known, there are several kinds of atoms in space. The kind of atom is called element. Element is represented by atomic number ( Z ) that corresponds to the total number of protons. For example, the elements of Z = 1, 2 and 3 denote hydrogen, helium and lithium, respectively. When the same element has the different total number of neutrons, it is called isotope. As the magnitude of charge density of proton is e , the total charge density of atomic nucleus becomes + Ze . Z electrons are allocated around atomic nucleus. Note that the magnitude of electron charge density is e .
1.2 Wave-Particle Duality
Quantum particle is defined as particle with wave-particle duality. The wave property is incorporated through the concept of matter wave.
Picture 2
(1.1)
where is the wave-length of matter wave: h is Plank constant; m is the mass of quantum particle; v is the velocity of quantum particle. In electron, m denotes the mass of electron, which is expressed as m e. Though the energy of classical particle continuously changes, quantum particle has the discrete energy.
1.3 Bohr Model
Niels Bohr proposed a theoretical hydrogen model, which is well known as Bohr model, to express positions of electron and atomic nucleus, under consideration of wave-particle durability. In Bohr model, proton is located at atomic centre, and electron rotates around atomic centre, as shown in Fig.. The driving factor of the rotation is the Coulomb interaction ( f ) between proton and electron:
Quantum Computational Chemistry Modelling and Calculation for Functional Materials - image 3
(1.2)
where 0 is dielectric constant of vacuum; r is orbit radius. The centrifugal force, which is obtained from the classical equation of circular motion, is equal to the Coulomb interaction.
Quantum Computational Chemistry Modelling and Calculation for Functional Materials - image 4
(1.3)
Fig 12 Schematic drawing of Bohr model Proton is located at atomic centre - photo 5
Fig. 1.2
Schematic drawing of Bohr model. Proton is located at atomic centre, and electron goes around an orbit
The equation implies that quantum effect is taken into account, by applying the concept of matter wave to electron. Electron goes around an orbit, and orbit distance is mathematically determined to be 2 r . It must be also integer-multiple of wave-length of matter wave.
14 By the substitution of Eq it is rewritten 15 By the - photo 6
(1.4)
By the substitution of Eq. (), it is rewritten:
15 By the substitution of Eq the orbit radius of hydrogen is - photo 7
(1.5)
By the substitution of Eq. (), the orbit radius of hydrogen is obtained:
16 As orbit radius depends on integer n it is found that orbit radius - photo 8
(1.6)
As orbit radius depends on integer ( n ), it is found that orbit radius is quantized. It implies that orbital radius has only discrete value. The orbit radius of n = 1 is called Bohr radius. The value is estimated to be 0.5292 .
Let us consider an electron energy. It is obtained by the summation of electron kinetic energy (KE) and potential energy (PE). In classical manner, KE is given by
Quantum Computational Chemistry Modelling and Calculation for Functional Materials - image 9
(1.7)
From Coulombs law, PE is given by
Quantum Computational Chemistry Modelling and Calculation for Functional Materials - image 10
(1.8)
It is defined that PE is zero, when electron is infinitely apart from proton. Hence, potential energy exhibits negative value. Finally, the total energy of electron is given by
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