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Nobuhiko Yamamoto - Single Molecule Microscopy in Neurobiology

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Nobuhiko Yamamoto Single Molecule Microscopy in Neurobiology

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Volume 154 Neuromethods Series Editor Wolfgang Walz University of - photo 1
Volume 154
Neuromethods
Series Editor
Wolfgang Walz
University of Saskatchewan, Saskatoon, SK, Canada

For further volumes: http://www.springer.com/series/7657

Neuromethodspublishes cutting-edge methods and protocols in all areas of neuroscience as well as translational neurological and mental research. Each volume in the series offers tested laboratory protocols, step-by-step methods for reproducible lab experiments and addresses methodological controversies and pitfalls in order to aid neuroscientists in experimentation.Neuromethodsfocuses on traditional and emerging topics with wide-ranging implications to brain function, such as electrophysiology, neuroimaging, behavioral analysis, genomics, neurodegeneration, translational research and clinical trials.Neuromethodsprovides investigators and trainees with highly useful compendiums of key strategies and approaches for successful research in animal and human brain function including translational bench to bedside approaches to mental and neurological diseases.

Editors
Nobuhiko Yamamoto and Yasushi Okada
Single Molecule Microscopy in Neurobiology
Editors Nobuhiko Yamamoto Laboratory of Cellular and Molecular Neurobiology - photo 2
Editors
Nobuhiko Yamamoto
Laboratory of Cellular and Molecular Neurobiology, Graduate School of Frontier Biosciences, Osaka University, Suita, Osaka, Japan
Yasushi Okada
Laboratory for Cell Polarity Regulation, RIKEN Center for Biosystems Dynamics Research, Suita, Osaka, Japan
ISSN 0893-2336 e-ISSN 1940-6045
Neuromethods
ISBN 978-1-0716-0531-8 e-ISBN 978-1-0716-0532-5
https://doi.org/10.1007/978-1-0716-0532-5
Springer Science+Business Media, LLC, part of Springer Nature 2020
This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed.
The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use.
The publisher, the authors, and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, expressed or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

This Humana imprint is published by the registered company Springer Science+Business Media, LLC, part of Springer Nature.

The registered company address is: 1 New York Plaza, New York, NY 10004, U.S.A.

Preface to the Series

Experimental life sciences have two basic foundations: concepts and tools. The Neuromethods series focuses on the tools and techniques unique to the investigation of the nervous system and excitable cells. It will not, however, shortchange the concept side of things as care has been taken to integrate these tools within the context of the concepts and questions under investigation. In this way, the series is unique in that it not only collects protocols but also includes theoretical background information and critiques which led to the methods and their development. Thus it gives the reader a better understanding of the origin of the techniques and their potential future development. The Neuromethods publishing program strikes a balance between recent and exciting developments like those concerning new animal models of disease, imaging, in vivo methods, and more established techniques, including, for example, immunocytochemistry and electrophysiological technologies. New trainees in neurosciences still need a sound footing in these older methods in order to apply a critical approach to their results.

Under the guidance of its founders, Alan Boulton and Glen Baker, the Neuromethods series has been a success since its first volume published through Humana Press in 1985. The series continues to flourish through many changes over the years. It is now published under the umbrella of Springer Protocols. While methods involving brain research have changed a lot since the series started, the publishing environment and technology have changed even more radically. Neuromethods has the distinct layout and style of the Springer Protocols program, designed specifically for readability and ease of reference in a laboratory setting.

The careful application of methods is potentially the most important step in the process of scientific inquiry. In the past, new methodologies led the way in developing new disciplines in the biological and medical sciences. For example, Physiology emerged out of Anatomy in the nineteenth century by harnessing new methods based on the newly discovered phenomenon of electricity. Nowadays, the relationships between disciplines and methods are more complex. Methods are now widely shared between disciplines and research areas. New developments in electronic publishing make it possible for scientists that encounter new methods to quickly find sources of information electronically. The design of individual volumes and chapters in this series takes this new access technology into account. Springer Protocols makes it possible to download single protocols separately. In addition, Springer makes its print-on-demand technology available globally. A print copy can therefore be acquired quickly and for a competitive price anywhere in the world.

Wolfgang Walz
Saskatoon, SK, Canada
Preface

For the past quarter of a century, many gene products, RNAs and proteins, have been identified to operate in the brain for physiological, anatomical, biochemical, and developmental functions. For instance, genetic and molecular biological approaches have identified various synaptic proteins and uncovered their essential roles in synaptic function. Those proteins localize and accumulate in either the pre- or post-synaptic regions, according to their functions. The precise localization of these proteins is inevitable for normal synaptic transmission and is dependent on the intracellular transport systems. Various RNAs and proteins are shown to be transported to their specific destinations in the axons and in the dendrites. The next intriguing issue is how these molecules are expressed and located in specific subcellular regions and function by interacting with other molecules. Conventional biochemical and molecular biological approaches might be insufficient to solve these problems in the highly heterogenous environment of the CNS. There are various cell types. Each cell of the same cell type, or even each synapse in the same neuron, would behave differently according to the neuronal connections and firing and synaptic activities. Therefore, it would be required to examine how the molecules of interest localize and function in specific subcellular locations in a neuron and how it changes dynamically by the physiological or external stimuli or development. Single-molecule imaging techniques enable us to examine the details of the localization and the dynamics of the molecules. There are, however, technical hurdles to apply these techniques to living cells, especially to living neuronal cells. In this book, the experts in this field introduce the methodology and technical issues in detail along with their own results. We believe that it would help readers to start their own single-molecule experiments by themselves.

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